Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs61867051 chr10:78979287 C/T 0.000118 111 14.22 15.73 0 KM Plot
LAML rs61867052 chr10:78979441 G/A 0.000118 111 14.22 15.73 0 KM Plot
LAML rs61867053 chr10:78981566 C/T 0.000118 111 14.22 15.73 0 KM Plot
LAML rs61868368 chr10:78988433 G/A 0.000118 111 14.22 15.73 0 KM Plot
LAML rs61868369 chr10:78994260 T/A 0.000118 111 14.22 15.73 0 KM Plot
LAML rs61889554 chr11:58424081 C/A 3.11E-5 110 20.27 11.13 4.58 KM Plot
LAML rs61903072 chr11:58097016 G/A 2.05E-5 111 18.75 12.17 4.58 KM Plot
LAML rs61972492 chr13:100088144 G/T 5.58E-5 111 17.23 10.67 1.02 KM Plot
LAML rs61986782 chr14:90751344 C/T 9.99E-6 109 12.7 21.32 1.03 KM Plot
LAML rs61986784 chr14:90764144 G/C 2.84E-6 109 13.2 21.87 1.03 KM Plot
LAML rs61989986 chr14:90739180 G/A 7.43E-6 109 12.7 21.87 1.03 KM Plot
LAML rs62031724 chr16:15979117 G/A 0.000171 110 16.23 13.1 0 KM Plot
LAML rs62031725 chr16:15979318 G/A 0.000171 110 16.23 13.1 0 KM Plot
LAML rs62110829 chr2:19946116 C/T 2.9E-12 110 17.78 15.17 0 KM Plot
LAML rs62117506 chr19:53388554 C/T 4.99E-5 105 16.3 21.82 1.03 KM Plot